Device

Part:BBa_K1627004:Design

Designed by: Alejandro Gutierrez   Group: iGEM15_Austin_UTexas   (2015-09-10)


Device to demethylate paraxanthine


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 7
    Illegal NheI site found at 30
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 1587
    Illegal BglII site found at 2083
    Illegal BglII site found at 2554
    Illegal XhoI site found at 3695
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 4393
    Illegal AgeI site found at 2222
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI site found at 983


Design Notes

These genes were amplified from the pDCAF3 plasmid (BBa_K734000). A PstI restriction site was removed from the ndmA gene during the cloning process. The genes were cloned into the pSB1C3 backbone using BioBrick Standard Assembly.


Source

The ndmA, ndmC, and ndmD genes were isolated from Pseudomonas putida CBB5. gst9 was isolated from Janthinobacterium sp. Marseille.

References